Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015807557.1_cds_XP_016494877.1_9252
CDS Infomation

[gene=LOC107814061] [db_xref=GeneID:107814061] [protein=IRK-interacting protein-like] [protein_id=XP_016494877.1] [location=complement(4611..6053)] [gbkey=CDS]
Sequence

ATGGCCAACAAGGTCTCCAATTTCTCCGATCTAATCCAACGTGTCACTGCTTCTTGCTTG
CTCCATCCACTTTCCTCTGGCCGTATTGACAGCAATATCTCCGATGCTCATTACAGCGAT
GAATCTGAAGATGACAAGTACAGTACCGAAGATGAAGAAGAAAAAGGAGACCTACCTTAT
GTGGAGACTCAGGAAAAATTCCAGAACGTTGAGGTCACAAAGGAGGAGATAAAAACTGAG
AAAGTAACTGAAATGGAGATGCTTTTAGGGGAAGTGTTCGACGTGGTGTCTGCAGTGAAG
ACGGCTTATGTTAGTCTCCAAGAGGCGCATTGTCCTTGGGATCAGGATAAAATGCGTGTG
GCTGACGTGGCTGTGATATCTGAACTGCGGAGGCTTGGGGTGTTGAGGGAACGATTTCGA
AGGAATATTGGTGGTGGAATTAGAAAAGGGGACTGGAGAGTCGGCGCCGCTACGTTGAGA
GAAGTGGTGGCACCATATGAAGCTACCATGGAGGAACTGAGGCAAGAAGTGAAGGCCAAA
GAAATCGAGATTGATAATTTGAGGGAGAAGCTGAAAATGGCAACAAGTCTTAGCAGCAGT
GGTGGAAAGAAAAGCAAGTCAAAGCGAAAAATTAGTTGTAGCAGTCAAGCTCCAGTTGCA
ATGTCGCCAGCACCTGACGTATTTGAAACTACAGTGAGCTTAGTAAAAGAAGCCTCAAAA
TCCTTCACGAGTTTGCTGCTCTCCTTGATGCGCTCTGCCCACTGGGACATTGCAGCGGCT
GTGAGATCCATCGAAGCTGCTTCATCCAACACAAACACACCCACAGCAGATTCAATTGTC
GGATCCAACCATGCCAAATACGCACTGGAATCTTACGTGAACCACAAAATGTTCCAAGGA
TTCGATCACGAGACGTTCTACTTGGACGGAAGCTTGTCATCACTGCTCCACCCAGATCAA
CACCGGCGCGATTGTTTTACACAGTACAGGGACATGAAAGCAATGGACCCAATGGAACTT
CTGGGAATTCTCCCAACTTGCAGTTTCGGGAACTTCTGTTTCAAGAAGTACTTGGCCATT
GTGCACCCAAAAATGGAGGAGTCTCTGTTTGGTGATTTGGAGCAGCGACGACAGGTGTTG
GCAGGGAACCATCCGAGGAGTCAGTTCTATGGGGAGTTTCTGGGGCTGGCAAAGGCCGTT
TGGCTGCTGCATTTGCTAACCTTTTCTTTGGATCCTCCGCCAAGTCATTTCGAGGCAAGC
AAAGGATCGGAGTTTCACCCGCAGTACATGGAGAGTGTGGTGAAGTATTCAATTTCCATG
GGGATAGGAGGGAGAATGGGTATGGGTCTAGTTGTTGGATTTCCAGTTAGTCCCGGGTTT
AAGCTGGGAAATGGATCAGTTGTTAAGGCTAGAGTTTATTTAGTCCCCAAAAATGGGTTT
TAA

Peptide Sequence

PEP ID

XP_016494877.1
PEP Infomation

PREDICTED: IRK-interacting protein-like [Nicotiana tabacum]
Sequence

MANKVSNFSDLIQRVTASCLLHPLSSGRIDSNISDAHYSDESEDDKYSTEDEEEKGDLPY
VETQEKFQNVEVTKEEIKTEKVTEMEMLLGEVFDVVSAVKTAYVSLQEAHCPWDQDKMRV
ADVAVISELRRLGVLRERFRRNIGGGIRKGDWRVGAATLREVVAPYEATMEELRQEVKAK
EIEIDNLREKLKMATSLSSSGGKKSKSKRKISCSSQAPVAMSPAPDVFETTVSLVKEASK
SFTSLLLSLMRSAHWDIAAAVRSIEAASSNTNTPTADSIVGSNHAKYALESYVNHKMFQG
FDHETFYLDGSLSSLLHPDQHRRDCFTQYRDMKAMDPMELLGILPTCSFGNFCFKKYLAI
VHPKMEESLFGDLEQRRQVLAGNHPRSQFYGEFLGLAKAVWLLHLLTFSLDPPPSHFEAS
KGSEFHPQYMESVVKYSISMGIGGRMGMGLVVGFPVSPGFKLGNGSVVKARVYLVPKNGF

Transcript Sequence

Gene sequence data has not been registered.